International Journal of Engineering and Management Research (IJEMR)
  • Year: 2016
  • Volume: 6
  • Issue: 6

A Review on Computational Methods Used in Construction of Protein Protein Interaction Network

  • Author:
  • M. Mary Sujatha1, K. Srinivas2, R. Kiran Kumar3
  • Total Page Count: 7
  • Page Number: 71 to 77

1Research Scholar, Department of Computer Science, Krishna University, Machilipatnam, Andhra Pradesh, India

2Professor, Department of CSE, VR Siddhartha Engineering College, Vijayawada, Andhra Pradesh, India

3Assistant Professor, Department of Computer Science, Krishna University, Machilipatnam, Andhra Pradesh, India

Online published on 24 October, 2017.

Abstract

Analysis of Protein Protein interaction Network helps in drug discovery and to predict functionality of a target protein. An approach called in silico and various other computational methodologies made a progressive milestone in proteomics. Computational approaches and methods reduce cost, expertise and time intervals when compare with other traditional approaches such as in vivo and in vitro. In this survey different computational approaches and methods such as genomic based methods, Homology based methods and biological mining techniques were discussed with their pros and cons in the area of protein protein interactions. It altogether gives an idea on available methods to build efficient protein protein interaction network for further research.

Keywords

PPI, in silico, Amino Acids (AA), STRING, SVM