Journal of Agricultural Engineering
Open Access
  • Year: 2016
  • Volume: 53
  • Issue: 2

Kinetic Binding Analysis of Biomolecular Interactions Using Surface Plasmon Resonance System

  • Author:
  • K. Narsaiah1,, S.N. Jha2, Pranita Jaiswal3, Ashish Kumar Singh4, Poonam Preet Kaur4, Rajiv Sharma4, Ramesh Kumar5
  • Total Page Count: 7
  • Page Number: 38 to 44

1ICAR National Fellow, ICAR-Central Institute of Post-harvest Engineering and Technology, Ludhiana-141004, Punjab, India

2ADG (PE), Agrie. Engineering Division, ICAR, KAB II, New Delhi-110012

3Senior Scientist, Agriculture Structures and Environmental Control Division, ICAR-Central Institute of Post-harvest Engineering and Technology, Ludhiana-141004, Punjab, India

4Former Research Associates, Agriculture Structures and Environmental Control Division, ICAR-Central Institute of Post-harvest Engineering and Technology, Ludhiana-141004, Punjab, India

5Senior Scientist, Horticulture Crop Processing Division, ICAR-Central Institute of Post-harvest Engineering and Technology, Abohar-152116, Punjab, India

*Corresponding author email: knarsan@yahoo.com

Online published on 23 September, 2016.

Abstract

Surface plasmon resonance (SPR) technology is a versatile and sensitive tool widely used for kinetic studies of interactions between unlabelled biomolecules in real time. The interactions of 4-carboxy benzene sulfonamide (4-CBS) inhibitor, with the enzyme carbonic anhydrase II (CA II) and Interleukin 2 with its antibody (IL 2 antibody) were determined at different concentrations by injecting at a flow rate of 100 fil.miir1 for 60s (100 jul) for a 1 min association phase, which was followed by a 2 min dissociation phase. Langmuir model yielded the rate constants ka and kd, which were of the order of 1.58E+3 M-1. s-1 and 0.04 s-1, respectively, and equilibrium dissociation constant was 2.45E-7 M. Automatic artifact removal, using software options and double referencing (by injection of running buffer to nullify non-specific interactions), further improved the quality of response. Langmuir model yielded the rate constants ka and kd, which were of the order of 2.79E+5 M1.s-1 and 1.43E-4 s-1, respectively, and equilibrium dissociation constant was 5.17E-7 M. The results illustrate the potential of such kinetic analysis in disease management, drug discovery and for detection of pathogens, toxins, pesticides and antibiotic residues based on either enzyme inhibition or antigen-antibody binding.

Keywords

Antigen, antibody, small molecule, biomolecular interaction, binding kinetics, enzyme inhibition