Legume Research - An International Journal
Web of Science
  • Year: 2017
  • Volume: 40
  • Issue: 3

26S: Novel reference gene from leaves and roots of common bean for biotic stress expression expression studies based on PCR

  • Author:
  • Victor Montero-Tavera1, María A. Escobedo-Landín1, Jorge A. Acosta-Gallegos1, José L. Anaya-Lopez1, Jorge E. Ruiz-Nieto2,
  • Total Page Count: 5
  • Page Number: 429 to 433

1Campo Experimental Bajío, Instituto Nacional de Investigaciones Forestales, Agrícolas y Pecuarias, Celaya C.P. 38110, Guanajuato, México

2Departamento de Agronomía, División de Ciencias de la Vida, Universidad de Guanajuato Campus Irapuato-Salamanca, Irapuato C.P. 36500, Guanajuato, México

Campo Experimental Bajío, Instituto Nacional de Investigaciones Forestales, Agrícolas y Pecuarias, Celaya C.P. 38110, Guanajuato, México

*Corresponding author's e-mail: jorge.ruiz@ugto.mx

Online published on 3 July, 2017.

Abstract

The aim of this study was to evaluate the variation in the expression levels of five traditional housekeeping genes under contrasting conditions of abiotic stress to identify the most stable reference gene. In the evaluation of expression levels by RT-PCR, the gene with less variation among cultivars and treatments was the ribosomal 26S. Regarding to the variation between foliage and root tissues the more stable genes were β-tubulin and 26S, while between phenological stages the best were 26S and the 1-β elongation factor. The evaluation of expression levels by absolute qPCR confirmed that the 26S gene is a stable reference for the study of gene expression based on the PCR technique due to its low coefficient of variation through contrasting abiotic stress conditions.

Keywords

Housekeeping genes, Phaseolus vulgaris, Trasncriptome, Variation in expression levels