1ICAR-Sugarcane Breeding Institute, Coimbatore-641007, Tamil Nadu, India
2Kerala Agricultural University, Centre for Plant Biotechnology & Molecular Biology, Vellanikara, Thrissur-680656, Kerala, India
3ICAR-Indian Agricultural Research Institute, New Delhi-110012, India
4National Research Centre for Oil Palm, West Godavari District-534435, Andhra Pradesh, India
5CPPS, Tamil Nadu Agricultural University, Coimbatore-641003, Tamil Nadu, India
*Corresponding author e-mail: Ramaswamy Manimekalai (rmanimekalaiicar@gmail.com)
Online published on 5 March, 2025.
Initial molecular diagnostic tools involved PCR amplification, often requiring nested PCR due to the low titre of phytoplasmas in infected palm and other species host tissues. This was followed by advanced techniques such as quantitative PCR assays and digital PCR, which offer enhanced sensitivity and accuracy. The development of isothermal diagnostic platforms, including the loop-mediated isothermal amplification assay, has further expanded the toolkit for phytoplasma detection in diverse hosts. The integration of CRISPR-based diagnostics holds immense potential for rapid, specific, and sensitive detection of phytoplasmas. CRISPR platforms, with their programmability and precision, could enable point-of-care detection and multiplexed assays for simultaneous identification of multiple pathogens.
LAMP, CRISPR, ddPCR, Root wilt, Arecanut yellow leaf