Phytopathogenic Mollicutes

SCOPUS
  • Year: 2023
  • Volume: 13
  • Issue: 1

Understanding interactions of ‘Candidatus Phytoplasma solani’ with grapevine through the lens of complex networks

  • Author:
  • Marina Dermastia1,*, Blaz Skrlj2, Anita Valmarska2,7, Rebeka Strah1,3, Novak Marusa Pompe1,4, Barbara Anzic1, Spela Tomaz1,3, Maja Kriznik1, Christina Schonhuber5, Monika Riedle-Bauer6, Marko Petek1, Ales Kladnik7, Nada Lavrac2, Kristina Gruden1, Thomas Roitsch8, Gunter Brader5
  • Total Page Count: 2
  • Page Number: 9 to 10

1National Institute of Biology, Ljubljana, Slovenia

2Institue Jozef Stefan, Ljubljana, Slovenia

7University of Ljubljana, Ljubljana, Slovenia

3Jozef Stefan International Postgraduate School, Ljubljana, Slovenia

4University of Nova Gorica, Nova Gorica, Slovenia

5Austrian Institute of Technology, Wien, Austria

6Federal College and Research Institute for Viticulture and Pomology, Wien, Austria

8University of Copenhagen, Copenhagen, Denmark

Abstract

Candidatus Phytoplasma solani’ is the agent associated with the most widespread grapevine yellows disease, the “bois noir”, which causes significant economic losses every year. Understanding the interaction between this phytoplasma and the grapevine disease in question remains an intriguing open problem. New approaches developed to improve the understanding of the infection through complex network-based modelling are presented. This computational modelling allows seamless integration of data from multiple sources and provides insights into relationships between genes or other entities of interest. Two approaches and the newly obtained results that further improve the understanding of “bois noir” and other grapevine yellows are reported.

Keywords

‘Candidatus Phytoplasma solani’, Grapevine, “bois noir”, RNA-seq, Srna-seq, Mirna, Hormones